Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

Download FIRM

Citation

Genes Targeted by hsa-mir-342-5p in CA Bladder Dyrskjot Cluster 46 Table contains all genes in the CA Bladder Dyrskjot cluster number 46. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-342-5p 23625 FAM89B family with sequence similarity 89, member B [Source:HGNC Symbol;Acc:16708] T 4793 NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:HGNC Symbol;Acc:7798] zzz999 55702 CCDC94 coiled-coil domain containing 94 [Source:HGNC Symbol;Acc:25518] zzz999 51157 ZNF580 zinc finger protein 580 [Source:HGNC Symbol;Acc:29473] zzz999 51657 STYXL1 serine/threonine/tyrosine interacting-like 1 [Source:HGNC Symbol;Acc:18165] zzz999 8677 STX10 syntaxin 10 [Source:HGNC Symbol;Acc:11428] zzz999 6631 SNRPC small nuclear ribonucleoprotein polypeptide C [Source:HGNC Symbol;Acc:11157] zzz999 3054 HCFC1 host cell factor C1 (VP16-accessory protein) [Source:HGNC Symbol;Acc:4839] T 1174 AP1S1 adaptor-related protein complex 1, sigma 1 subunit [Source:HGNC Symbol;Acc:559] T 2644 GCHFR GTP cyclohydrolase I feedback regulator [Source:HGNC Symbol;Acc:4194] T 23367 LARP1 La ribonucleoprotein domain family, member 1 [Source:HGNC Symbol;Acc:29531] T 27044 SND1 staphylococcal nuclease and tudor domain containing 1 [Source:HGNC Symbol;Acc:30646] zzz999 6723 SRM spermidine synthase [Source:HGNC Symbol;Acc:11296] zzz999 10452 TOMM40 translocase of outer mitochondrial membrane 40 homolog (yeast) [Source:HGNC Symbol;Acc:18001] T 51069 MRPL2 mitochondrial ribosomal protein L2 [Source:HGNC Symbol;Acc:14056] T 402 ARL2 ADP-ribosylation factor-like 2 [Source:HGNC Symbol;Acc:693] T 10695 CNPY3 canopy 3 homolog (zebrafish) [Source:HGNC Symbol;Acc:11968] zzz999 7515 XRCC1 X-ray repair complementing defective repair in Chinese hamster cells 1 [Source:HGNC Symbol;Acc:12828] zzz999 79709 GLT25D1 glycosyltransferase 25 domain containing 1 [Source:HGNC Symbol;Acc:26182] zzz999 9274 BCL7C B-cell CLL/lymphoma 7C [Source:HGNC Symbol;Acc:1006] zzz999 11332 ACOT7 acyl-CoA thioesterase 7 [Source:HGNC Symbol;Acc:24157] zzz999 7064 THOP1 thimet oligopeptidase 1 [Source:HGNC Symbol;Acc:11793] zzz999 126208 ZNF787 zinc finger protein 787 [Source:HGNC Symbol;Acc:26998] zzz999 54361 WNT4 wingless-type MMTV integration site family, member 4 [Source:HGNC Symbol;Acc:12783] T 4150 MAZ MYC-associated zinc finger protein (purine-binding transcription factor) [Source:HGNC Symbol;Acc:6914] T 54862 CC2D1A coiled-coil and C2 domain containing 1A [Source:HGNC Symbol;Acc:30237] T 9296 ATP6V1F ATPase, H+ transporting, lysosomal 14kDa, V1 subunit F [Source:HGNC Symbol;Acc:16832] zzz999 23144 ZC3H3 zinc finger CCCH-type containing 3 [Source:HGNC Symbol;Acc:28972] T 805 CALM1 calmodulin 1 (phosphorylase kinase, delta) [Source:HGNC Symbol;Acc:1442] zzz999 60343 FAM3A family with sequence similarity 3, member A [Source:HGNC Symbol;Acc:13749] T 29763 PACSIN3 protein kinase C and casein kinase substrate in neurons 3 [Source:HGNC Symbol;Acc:8572] zzz999 55697 VAC14 Vac14 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:25507] T 11021 RAB35 RAB35, member RAS oncogene family [Source:HGNC Symbol;Acc:9774] T 2068 ERCC2 excision repair cross-complementing rodent repair deficiency, complementation group 2 [Source:HGNC Symbol;Acc:3434] zzz999 7311 UBA52 ubiquitin A-52 residue ribosomal protein fusion product 1 [Source:HGNC Symbol;Acc:12458] zzz999 8331 HIST1H2AJ histone cluster 1, H2aj [Source:HGNC Symbol;Acc:4727] zzz999 10053 AP1M2 adaptor-related protein complex 1, mu 2 subunit [Source:HGNC Symbol;Acc:558] zzz999 6449 SGTA small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:HGNC Symbol;Acc:10819] T 8535 CBX4 chromobox homolog 4 [Source:HGNC Symbol;Acc:1554] zzz999 29888 STRN4 striatin, calmodulin binding protein 4 [Source:HGNC Symbol;Acc:15721] zzz999 91860 CALML4 calmodulin-like 4 [Source:HGNC Symbol;Acc:18445] T 1455 CSNK1G2 casein kinase 1, gamma 2 [Source:HGNC Symbol;Acc:2455] zzz999 10498 CARM1 coactivator-associated arginine methyltransferase 1 [Source:HGNC Symbol;Acc:23393] T 6455 SH3GL1 SH3-domain GRB2-like 1 [Source:HGNC Symbol;Acc:10830] T 84065 TMEM222 transmembrane protein 222 [Source:HGNC Symbol;Acc:25363] T 54985 HCFC1R1 host cell factor C1 regulator 1 (XPO1 dependent) [Source:HGNC Symbol;Acc:21198] zzz999 1209 CLPTM1 cleft lip and palate associated transmembrane protein 1 [Source:HGNC Symbol;Acc:2087] zzz999 8175 SF3A2 splicing factor 3a, subunit 2, 66kDa [Source:HGNC Symbol;Acc:10766] zzz999 79792 GSDMD gasdermin D [Source:HGNC Symbol;Acc:25697] zzz999 79763 ISOC2 isochorismatase domain containing 2 [Source:HGNC Symbol;Acc:26278] zzz999 54972 TMEM132A transmembrane protein 132A [Source:HGNC Symbol;Acc:31092] zzz999 5886 RAD23A RAD23 homolog A (S. cerevisiae) [Source:HGNC Symbol;Acc:9812] T 5524 PPP2R4 protein phosphatase 2A activator, regulatory subunit 4 [Source:HGNC Symbol;Acc:9308] T 8566 PDXK pyridoxal (pyridoxine, vitamin B6) kinase [Source:HGNC Symbol;Acc:8819] T 1059 CENPB centromere protein B, 80kDa [Source:HGNC Symbol;Acc:1852] T 24140 FTSJ1 FtsJ homolog 1 (E. coli) [Source:HGNC Symbol;Acc:13254] zzz999 126299 ZNF428 zinc finger protein 428 [Source:HGNC Symbol;Acc:20804] zzz999 8568 RRP1 ribosomal RNA processing 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:18785] zzz999 23154 NCDN neurochondrin [Source:HGNC Symbol;Acc:17597] T 79643 CHMP6 chromatin modifying protein 6 [Source:HGNC Symbol;Acc:25675] zzz999 3695 ITGB7 integrin, beta 7 [Source:HGNC Symbol;Acc:6162] zzz999 26233 FBXL6 F-box and leucine-rich repeat protein 6 [Source:HGNC Symbol;Acc:13603] zzz999 1984 EIF5A eukaryotic translation initiation factor 5A [Source:HGNC Symbol;Acc:3300] T 1639 DCTN1 dynactin 1 [Source:HGNC Symbol;Acc:2711] zzz999 6835 SURF2 surfeit 2 [Source:HGNC Symbol;Acc:11475] zzz999 55544 RBM38 RNA binding motif protein 38 [Source:HGNC Symbol;Acc:15818] zzz999 53615 MBD3 methyl-CpG binding domain protein 3 [Source:HGNC Symbol;Acc:6918] zzz999 30000 TNPO2 transportin 2 [Source:HGNC Symbol;Acc:19998] T 113457 TUBA3D tubulin, alpha 3d [Source:HGNC Symbol;Acc:24071] zzz999 64130 LIN7B lin-7 homolog B (C. elegans) [Source:HGNC Symbol;Acc:17788] zzz999 23640 HSPBP1 HSPA (heat shock 70kDa) binding protein, cytoplasmic cochaperone 1 [Source:HGNC Symbol;Acc:24989] zzz999 8570 KHSRP KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:6316] zzz999 6522 SLC4A2 solute carrier family 4, anion exchanger, member 2 (erythrocyte membrane protein band 3-like 1) [Source:HGNC Symbol;Acc:11028] zzz999 3727 JUND jun D proto-oncogene [Source:HGNC Symbol;Acc:6206] zzz999 11230 PRAF2 PRA1 domain family, member 2 [Source:HGNC Symbol;Acc:28911] T 10245 TIMM17B translocase of inner mitochondrial membrane 17 homolog B (yeast) [Source:HGNC Symbol;Acc:17310] T 8260 NAA10 N(alpha)-acetyltransferase 10, NatA catalytic subunit [Source:HGNC Symbol;Acc:18704] T 79073 TMEM109 transmembrane protein 109 [Source:HGNC Symbol;Acc:28771] zzz999 8189 SYMPK symplekin [Source:HGNC Symbol;Acc:22935] zzz999 6666 SOX12 SRY (sex determining region Y)-box 12 [Source:HGNC Symbol;Acc:11198] P T 369 ARAF v-raf murine sarcoma 3611 viral oncogene homolog [Source:HGNC Symbol;Acc:646] T 81620 CDT1 chromatin licensing and DNA replication factor 1 [Source:HGNC Symbol;Acc:24576] T 6829 SUPT5H suppressor of Ty 5 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11469] zzz999 5605 MAP2K2 mitogen-activated protein kinase kinase 2 [Source:HGNC Symbol;Acc:6842] zzz999 11133 KPTN kaptin (actin binding protein) [Source:HGNC Symbol;Acc:6404] zzz999 26099 C1orf144 chromosome 1 open reading frame 144 [Source:HGNC Symbol;Acc:30232] T 6510 SLC1A5 solute carrier family 1 (neutral amino acid transporter), member 5 [Source:HGNC Symbol;Acc:10943] zzz999 113878 zzz999 Protein deltex-2 [Source:UniProtKB/Swiss-Prot;Acc:Q86UW9] T 5127 CDK16 cyclin-dependent kinase 16 [Source:HGNC Symbol;Acc:8749] T 10634 GAS2L1 growth arrest-specific 2 like 1 [Source:HGNC Symbol;Acc:16955] zzz999 5971 RELB v-rel reticuloendotheliosis viral oncogene homolog B [Source:HGNC Symbol;Acc:9956] T 7423 VEGFB vascular endothelial growth factor B [Source:HGNC Symbol;Acc:12681] zzz999 7376 NR1H2 nuclear receptor subfamily 1, group H, member 2 [Source:HGNC Symbol;Acc:7965] T 4296 MAP3K11 mitogen-activated protein kinase kinase kinase 11 [Source:HGNC Symbol;Acc:6850] zzz999 79759 ZNF668 zinc finger protein 668 [Source:HGNC Symbol;Acc:25821] zzz999 23780 APOL2 apolipoprotein L, 2 [Source:HGNC Symbol;Acc:619] zzz999 9311 ACCN3 amiloride-sensitive cation channel 3 [Source:HGNC Symbol;Acc:101] zzz999 6830 SUPT6H suppressor of Ty 6 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:11470] zzz999 79050 NOC4L nucleolar complex associated 4 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:28461] zzz999

Need help? Please contact cplaisier(at)systemsbiology.org if you have any questions, comments or concerns. Developed at the Institute for Systems Biology in the Baliga Lab.